FastQCFastQC Report
Wed 6 Dec 2017
SRR330913_NN.fastq.gz.fasta.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR330913_NN.fastq.gz.fasta.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17313708
Sequences flagged as poor quality0
Sequence length36
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTAAAC287750.030.0690671
TCAGTGC110700.030.0124551
TGAGGTA1550050.030.0105361
CTATCGA254.2386405E-429.98805212
CGTTACC95650.029.94635
CCGTTAC95950.029.9308174
TACCCTG204050.029.9234091
TGAGATG2669550.029.9183081
TTCACAG147550.029.903271
TCAACGC14500.029.88876
GTCTACG19750.029.8840031
ACTGGAC151100.029.8800321
ATAGTTA750400.029.87329717
TATAGTT781900.029.87073316
CCATTAC95800.029.86258310
TAGTAGG1055100.029.8528376
ATTGGTG413200.029.8371873
AGTAGGT1057050.029.8369717
GTAGGTT1056700.029.82848
TAGGTTG1056100.029.8245229
Produced by FastQC (version 0.11.2)