FastQCFastQC Report
Wed 6 Dec 2017
SRR330911_NN.fastq.gz.fasta.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR330911_NN.fastq.gz.fasta.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14111920
Sequences flagged as poor quality0
Sequence length36
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATACG200.00496018130.2303411
TACGTCA352.7341684E-630.2303411
CGCAACC2200.030.230341
TGAGGTA1595650.030.0797211
ACTGGAC110650.030.0664141
GTCTACG54350.030.007851
TCCCTGG208450.029.9983021
TCAGTGC112500.029.9884951
ACGACGC402.4649125E-729.9402713
ACGAAGC200.005199621429.9402715
CAACGCT16700.029.938687
TACGCGT200.00520097329.9386816
TGAGATG770600.029.8811951
ATTGGTG1027400.029.8776153
GCATTGG1035300.029.8755651
TGTAAAC154150.029.8675351
TATAGTT914550.029.84865616
CGTTACC62800.029.844925
CCGTTAC62500.029.8444614
ATAGTTA870400.029.83022517
Produced by FastQC (version 0.11.2)