FastQCFastQC Report
Wed 6 Dec 2017
SRR330910_NN.fastq.gz.fasta.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR330910_NN.fastq.gz.fasta.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6509963
Sequences flagged as poor quality0
Sequence length36
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACCAG451.9957952E-830.05176714
ATCCTAC13100.030.0013758
GCTACGT700.030.00021610
ATTCGCT303.5266283E-529.95831524
CTATACG200.00518979629.9516161
CGTTAGT850.029.9246035
CACCGGA29950.029.92033611
TATAGTT455000.029.8986416
CTACAGA118300.029.8856379
ACTACAG119600.029.8759528
ACCGGAG29850.029.87245412
TCAGTGC143700.029.857821
ATAGTTA432650.029.85565617
TGAGGTA811350.029.8427121
CGACTGG53650.029.81407413
CACTACA119800.029.8005717
TGTAAAC88550.029.7994021
AAGTTCC22850.029.79331213
GTTGTGT85550.029.77262512
AGTAGGT504900.029.7691757
Produced by FastQC (version 0.11.2)