FastQCFastQC Report
Wed 6 Dec 2017
SRR330908_NN.fastq.gz.fasta.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR330908_NN.fastq.gz.fasta.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20414741
Sequences flagged as poor quality0
Sequence length36
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATACG402.4243673E-729.9971561
ATTGGTG1699300.029.8935173
CAACGCT18000.029.8610047
TGAGGTA1902100.029.8607391
TCCCTGG525400.029.8572731
TATAGTT1043900.029.80498716
TAGTAGG1323900.029.7993166
TCAGTGC187800.029.7895071
ATAGTTA996650.029.7818717
TAGGTTG1323950.029.7756129
GTAGGTT1325450.029.7746728
CGTTACC61300.029.7745255
GCCGAGC174850.029.7642910
CCGTTAC61400.029.7504184
TGAGATG1172300.029.742551
CCCTGGT527800.029.7419052
AGTAGGT1326700.029.7365327
AGGTTGT1330150.029.73362410
GAGGTAG1921800.029.7233352
GTTGTGT245500.029.7184612
Produced by FastQC (version 0.11.2)