FastQCFastQC Report
Wed 6 Dec 2017
SRR330865_PP.fastq.gz.fasta.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR330865_PP.fastq.gz.fasta.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21826381
Sequences flagged as poor quality0
Sequence length36
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATACG303.3101074E-530.2381671
TAGCTTA1860350.030.104071
TGAGGTA2165950.030.0950681
ACTGGAC293800.030.0734921
TCAGTGC136450.030.071961
TTCACAG359250.030.0529921
TGTAAAC313700.030.0068241
TGAGATG1457400.029.9923021
CATTGCG200.00516148329.985462
CCGCTTT303.505435E-529.98525618
ATTGCGG200.005161887529.984983
TTTACGT303.5059827E-529.984575
CCGTTAC84350.029.9493664
CGTTACC84250.029.9489775
GTCTACG30500.029.891171
ATTGGTG1299350.029.8534433
GTTGACA1055950.029.84469418
TATAGTT1311200.029.84420616
CCATTAC84600.029.84368710
TAGTAGG1397050.029.8407676
Produced by FastQC (version 0.11.2)