FastQCFastQC Report
Wed 6 Dec 2017
SRR330864_PP.fastq.gz.fasta.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR330864_PP.fastq.gz.fasta.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18798259
Sequences flagged as poor quality0
Sequence length36
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTATACG254.016752E-430.2645781
TGAGGTA1205500.030.1252441
TAGCTTA759050.030.1250291
ACTGGAC283850.030.0993161
TCCCTGG394750.030.0805741
GCGTACT402.424822E-729.9964821
CGAATTA200.00516246429.98427614
TCGTTAC200.00516259829.9841164
TACGCGT352.9141902E-629.98411416
GGCAGTT1950.029.98387511
GTCTACG73950.029.9780981
TGAGATG500300.029.9530411
TTCACAG151800.029.9356161
ATTGGTG1912150.029.9326863
AAACCGT311700.029.9296021
CCGTTAC311150.029.9262964
CGTTACC310600.029.9253965
TATAGTT718250.029.89018616
CCATTAC310750.029.87773710
TCAGTGC105450.029.8771231
Produced by FastQC (version 0.11.2)