FastQCFastQC Report
Wed 6 Dec 2017
SRR837505.fastq.fasta.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR837505.fastq.fasta.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19118751
Sequences flagged as poor quality0
Sequence length50
%GC55

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATTTCA750.044.1344831
AACCGGG302.4772326E-644.1344831
TTTCATT94350.044.1344831
TTTCATA302.4772326E-644.1344831
TAATTTA207.74234E-444.1344831
TACGATT408.103598E-944.1344831
CCCTTAA408.103598E-944.1344831
TTTGCTT5450.044.1344831
TTACCGC351.413373E-744.1344831
TAAGATT502.7284841E-1144.1344831
TCGAAAC351.413373E-744.1344831
TTGGGCA207.74234E-444.1344831
TTAATTC6150.044.01682
ACGATTC408.296411E-944.01682
CAGATTC302.5231675E-644.01682
TTTATTC1100.044.01682
CTTTCCG207.8448147E-444.01682
TTCATAC408.296411E-944.01682
TTGATGC351.4433317E-744.0167962
TATTGAC351.4466968E-744.00378826
Produced by FastQC (version 0.11.2)