FastQCFastQC Report
Wed 6 Dec 2017
SRR837452.fastq.fasta.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR837452.fastq.fasta.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27232137
Sequences flagged as poor quality0
Sequence length50
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGGTA1400.044.4214441
TCTTGCA3100.044.4214441
TTGTGTA254.202252E-544.4214441
ATCTACA254.202252E-544.4214441
CAAAACG207.499179E-444.4214441
TGAAGCG407.652488E-944.4214441
TTTAAAC1150.044.4214441
CTATACG502.5465852E-1144.4214441
CTATACA254.202252E-544.4214441
TTATGGT407.652488E-944.4214441
TTCACAG850.044.4214441
GTCTACG1950.044.4214441
TTTCCTT1650.044.4214441
TGCGGTA254.202252E-544.4214441
TAACGGA254.202252E-544.4214441
ATCACAT207.499179E-444.4214441
TCAGGTA407.652488E-944.4214441
TAGCCGC850.044.4214441
TATTGTA502.5465852E-1144.4214441
TGTCTTA650.044.4214441
Produced by FastQC (version 0.11.2)